PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007647.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 433aa MW: 47092.2 Da PI: 9.7466

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007647.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	5.1e-05	199	220	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C++Cg+ F ++ L++H + H Oeu007647.1 199 CHKCGEQFGKWEALESHHLSkH 220 *****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MGEKKKDMPT VWFSLKKSLH CKSEPSDVYD PKTRKQLTAI LTRKSGRSGC SRSIANLKDV 60 IHGSKRHLEK PPSCSPRSIG SSEFLNPITH EVILSNSTCE LKITGFGGLQ EGGLHGGGGG 120 AGSTFVGTLR PGTPGPGGHP TMHYFNPSYR NTATPPRKTS LLEGIGNGNS ANFGGTNGLP 180 LKSRAPLDKD ANGSSSIACH KCGEQFGKWE ALESHHLSKH AVTELLEGDS SRKIVEIICR 240 SSWLKSDNHC VRIERVLKVH NMQKTLARFE EYRETVKVKA SKLPKKHPRC LADGNELLRF 300 YGTTLSCCLG MNGSSSLCIA ENRCCVCRII RQGFSTKKEL KGGIGVFTTS TSGRAFESIE 360 IHKEDIPVRK ALIVCRVIAG RVHRPLENIQ EIAGQTGFDS LAGKVGLYSN IEELYLLNPR 420 ALLPCFVVIC KP*

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MGEKKKDMPT VWFSLKKSLH CKSEPSDVYD PKTRKQLTAI LTRKSGRSGC SRSIANLKDV  60
IHGSKRHLEK PPSCSPRSIG SSEFLNPITH EVILSNSTCE LKITGFGGLQ EGGLHGGGGG  120
AGSTFVGTLR PGTPGPGGHP TMHYFNPSYR NTATPPRKTS LLEGIGNGNS ANFGGTNGLP  180
LKSRAPLDKD ANGSSSIACH KCGEQFGKWE ALESHHLSKH AVTELLEGDS SRKIVEIICR  240
SSWLKSDNHC VRIERVLKVH NMQKTLARFE EYRETVKVKA SKLPKKHPRC LADGNELLRF  300
YGTTLSCCLG MNGSSSLCIA ENRCCVCRII RQGFSTKKEL KGGIGVFTTS TSGRAFESIE  360
IHKEDIPVRK ALIVCRVIAG RVHRPLENIQ EIAGQTGFDS LAGKVGLYSN IEELYLLNPR  420
ALLPCFVVIC KP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-130	C2H2 family protein