PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu007561.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 192aa MW: 21925.7 Da PI: 6.2969 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 67.6 | 2.1e-21 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l++av+ +G++ Wk+Ia t g++R++k+c++rw +yl Oeu007561.1 18 RGAWTPEEDQKLAEAVEIHGPKLWKAIATTTGLNRCGKSCRLRWMNYL 65 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.5 | 4.3e-15 | 71 | 116 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++l+++++k+lG++ W++Ia +++ gR ++++k++w ++l Oeu007561.1 71 RGSMSDQEEDLILRLHKLLGNR-WSLIAGRLP-GRMDNEIKNYWKSHL 116 8999******************.*********.***********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MALTKVENLR PTKKEINRGA WTPEEDQKLA EAVEIHGPKL WKAIATTTGL NRCGKSCRLR 60 WMNYLRPNIK RGSMSDQEED LILRLHKLLG NRWSLIAGRL PGRMDNEIKN YWKSHLSKKI 120 DKSNEGISSK EEDSTSEELM REKINSSNFN VTGSDEDSKI SFDLDDFFDF SNENPSTLEW 180 VGKFVEFGGV D* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 1e-51 | MYB family protein |