PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu007560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 192aa MW: 21946.8 Da PI: 9.1458 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 65.9 | 7.1e-21 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l++av+ +G++ Wk+Ia t g++R++k+c++rw +yl Oeu007560.1 18 RGAWTPEEDRKLAEAVEIHGPKLWKAIATTTGLNRCGKSCRLRWMNYL 65 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52 | 1.6e-16 | 71 | 116 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++l+++++k+lG++ W++Ia +++ gRt++++k++w ++l Oeu007560.1 71 RGSMTDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWKSHL 116 899*******************.*********.***********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MALTKVENLR PTKKEINRGA WTPEEDRKLA EAVEIHGPKL WKAIATTTGL NRCGKSCRLR 60 WMNYLRPNIK RGSMTDQEED LILRLHKLLG NRWSLIAGRL PGRTDNEIKN YWKSHLGKKI 120 EKSNRGNSRK EGDSTSEELM REKINSSNFN VTGSDEDSKI SFDLDDFFDF SNENPSTLEW 180 VGKFVEFGGV D* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 2e-52 | MYB family protein |