PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu007546.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 240aa MW: 28222.9 Da PI: 9.2638 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.3 | 8.4e-19 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++vk++G g+W+ ++r g++R +k+c++rw +yl Oeu007546.1 16 KGPWTAEEDRLLIEYVKLHGEGRWNNVSRLAGLKRNGKSCRLRWVNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.9e-16 | 69 | 113 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E +++++++++G++ W+tIar ++ gRt++++k++w+++ Oeu007546.1 69 RGQITPHEKSIILELHAKWGNR-WSTIARSLP-GRTDNEIKNYWRTH 113 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 240 aa Download sequence |
MAQHMGWGAM EEGWRKGPWT AEEDRLLIEY VKLHGEGRWN NVSRLAGLKR NGKSCRLRWV 60 NYLRPDLKRG QITPHEKSII LELHAKWGNR WSTIARSLPG RTDNEIKNYW RTHFKKKGKP 120 TSENEEKSRL RLLKRQQFQL QQQQYQLQQQ QQEDEMNMKK IISMLDENDD NNGLPNFPQM 180 RQEIIYPNTN DESGFFYSMI NGYATMLETS NEDIMWGGLW NLDDCYGNFP AGNAINRAI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G13480.1 | 5e-77 | MYB family protein |