PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007516.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 348aa MW: 38965.5 Da PI: 5.7974

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007516.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	66.5	4.9e-21	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G g+Wk +++ g++R++k+c++rw +yl Oeu007516.1 17 KGPWTPEEDQKLVDCIQKYGHGNWKEVSKLAGLNRCGKSCRLRWTNYL 64 79********************************************97 PP
2	Myb_DNA-binding	55	1.9e-17	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++ +++++++lG++ W++Ia++++ gRt++++k++w++++ Oeu007516.1 70 RGTFSEEEEQTILELHALLGNK-WSAIASRLP-GRTDNEIKNFWNTHM 115 899*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MERSSTSGCD EWSGLKKGPW TPEEDQKLVD CIQKYGHGNW KEVSKLAGLN RCGKSCRLRW 60 TNYLRPDIKR GTFSEEEEQT ILELHALLGN KWSAIASRLP GRTDNEIKNF WNTHMKKKLL 120 QKGIDPATHM PRTDNLLINS LANIPPDQLL AAANSICINN ALACQYSTTA REFAKILYLD 180 NILQFLNADT GTGTSTSTSI DQLHQQYPTP LILDPQLEAL LHSNSTPYPH APASTFPNLN 240 VSQTIFRPEV EETSIKSTQV HINGTNHEYG TSASSFHTRD NYSIPEPIPA SSFEQPFIVN 300 TDDQTNKSNI ISPKDQFLNS STSTTFDALG DLMDDEASKY YWKQIIE*

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MERSSTSGCD EWSGLKKGPW TPEEDQKLVD CIQKYGHGNW KEVSKLAGLN RCGKSCRLRW  60
TNYLRPDIKR GTFSEEEEQT ILELHALLGN KWSAIASRLP GRTDNEIKNF WNTHMKKKLL  120
QKGIDPATHM PRTDNLLINS LANIPPDQLL AAANSICINN ALACQYSTTA REFAKILYLD  180
NILQFLNADT GTGTSTSTSI DQLHQQYPTP LILDPQLEAL LHSNSTPYPH APASTFPNLN  240
VSQTIFRPEV EETSIKSTQV HINGTNHEYG TSASSFHTRD NYSIPEPIPA SSFEQPFIVN  300
TDDQTNKSNI ISPKDQFLNS STSTTFDALG DLMDDEASKY YWKQIIE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	4e-79	MYB family protein