PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu007331.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 267aa    MW: 29428 Da    PI: 8.3589
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu007331.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.84e-053052223
                 EETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                  C+ Cg++F+  ++L++H+++ H
  Oeu007331.1 30 ACSECGEVFPKIDSLEHHQMVkH 52
                 6******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MQLRKLSGCY ECHAIVDPSR YPLPRSTICA CSECGEVFPK IDSLEHHQMV KHAVSELGVE  60
DSSRNIVEII FKSSWLKKDN PICKIERILK VHNTRRTIQR FEDYRDVVKI RANNNAKKNA  120
RCAADGNELL RFYCVTLNCS LGARGSSSLC SCLPGCGVCT IIRHGFQSNK LSGVRTTASS  180
GRAHDCLGCK DARRAMLVCR VIAGRVKHAT DVMTIEEEVG VGLSTGGLYD SVASCGGIYS  240
DIEELYVFNP RAILPCFVVI YRSLES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-107C2H2 family protein