PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu007187.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 287aa    MW: 31641.9 Da    PI: 8.6711
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu007187.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH47.82.4e-15202226226
                  -S---SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                  ktelC+ +++tGtC+yGd C+FaHg
  Oeu007187.1 202 KTELCNKWQQTGTCPYGDHCQFAHG 226
                  9***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MLLSSCLPRS HQIQLQHQDL IDRHHAVLSH LHKTAKQIQS LRQDNVNLKM ANIDLNHRLN  60
LLLGATSSFG LSGLDPGSSS GWGPVVDGLG KMSLGGEDGR GGEEEWDNEM TAALSEGLSE  120
SPKSVVDLGR VGGSGEERVS LPKSISVRSS GYLKTVRAVG MSSGGVQAKA LDRSKTQRVY  180
VNGGKKAEEA LELEVYNQGM LKTELCNKWQ QTGTCPYGDH CQFAHGIEEL RPVLRHPRYK  240
TEVCRMVLSG DHCPYGHRCH FRHALTDQEK FMRSMNTRSL KPLNYR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.13e-64C3H family protein