PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu006937.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C3H | ||||||||
Protein Properties | Length: 150aa MW: 17058.7 Da PI: 8.4634 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 24.3 | 5.6e-08 | 2 | 23 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C+ f+ +++C+yG++CkF H Oeu006937.1 2 KICNLFYNGHECRYGEKCKFLH 23 68******************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MKICNLFYNG HECRYGEKCK FLHERLMKFM TDISRQKRAR VVESIGATWP DLINKKDYAQ 60 PDYNLQSPGA RVETELIMNT GLKIPEEPLP IPVIGSSHAT AVIVAPANKD AERKKWKLDR 120 QVKGIYADWL DVFLPHHYSP SEEFISVGA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19360.1 | 2e-09 | C3H family protein |