PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu006607.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 131aa MW: 15257.8 Da PI: 10.058 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.7 | 1e-25 | 9 | 56 | 1 | 48 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ v ifs +gklye Oeu006607.1 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYE 56 79*********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
MARGKIQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGVFIFSA HGKLYEQASK 60 GYFKFSLILL SFFSLTMQSL IDRYMKYNRG AQAEQVIRDK EVVKQIQMYE YKYTYAKGYY 120 NFHDKESDAA * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 8e-38 | MIKC_MADS family protein |