PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006574.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 312aa    MW: 35069.5 Da    PI: 7.4683
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006574.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-152471148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++    G g+W+ Iar  g+ R++k+c++rw +yl
      Oeu006574.1 24 KGLWSPEEDEKLMNYMLINGQGCWSDIARNAGLQRCGKSCRLRWINYL 71
                     678*******************************************97 PP
2Myb_DNA-binding445.2e-1477119145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg+ +++E+el+++++  lG++ W+ Ia++++ gRt++ +k++w+
      Oeu006574.1  77 RGAISPQEEELILHLHSVLGNR-WSQIAARLP-GRTDNKIKNFWN 119
                      7889******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MRKPTPDSVI RDKGNHKNKI KFRKGLWSPE EDEKLMNYML INGQGCWSDI ARNAGLQRCG  60
KSCRLRWINY LRPDLKRGAI SPQEEELILH LHSVLGNRWS QIAARLPGRT DNKIKNFWNS  120
SIQKRLKNNN LTSTTFSPNK CSTVSISDTV TGGMIMPLHD YSYNVVNTCI DSSSSSSHFN  180
PFPPVDNSFD ANGSSVVVSL NLPTYVTHFG TATGNRGGLE DYGVTEQCLM GFENGICVPF  240
EVDDINNGVM SSNYVFDKKK VINNNLNNTE SMKLEDMVGF GNHWQGENFE VGELDWERLL  300
ANIKSLPYLD F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.16e-73MYB family protein