PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006478.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WRKY

Protein Properties

Length: 605aa MW: 64814.7 Da PI: 5.5687

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006478.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.1	2.4e-30	267	326	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+ Oeu006478.1 267 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHNHP 326 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MEPTMKKSDH EGEVKEENKA ETSSEDKGCE EDVALQVGNG KGDCGNDSLK SSIDQNNISK 60 HGPILTNIKR SSAEPDSMAS SSAKKDQDDH QLDLAKAEMG EVIEENQRLR MYLDQILKDY 120 RTLQLQYQDV VQQEAAKKST SPIRDSEEES AELISLSLGM SSSDQFIKKD GSCKISRKEK 180 VDEKSEKQGS LDLGLDCKFE VPPVKPSPIG SPETSVEEIK EETAGENFPP HNTLKNIVRN 240 GDDELSQQNP AKKARVSVRV RCDTPTMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP 300 VRKQVQRCAD DMSILITTYE GTHNHPLSVS ATAMASTTSA AASMLMSGSS ISGSSGATSS 360 STLTTNSVNL NGLNFHFSDN SSSKPFYLPN SSLSSSPSYP TITLDLTNSA SSARLGNFPP 420 RYSTTNLNFS SLESNALPIS WSNGVLNYGN PPYNKNQTGS LYFGSHPQET LYQAYLQKTL 480 NPTQQPLPPD SIAAATKAIA SDPSFQSALA AALTSIIGSG GATASTAGNQ TLGDESSKNI 540 KSSTEPNFPI LSSFPSPSNA NKCAPSLLNK LPSSSSSQPG GLMFLSNPFP FPTSKSNSDS 600 PGDK*

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MEPTMKKSDH EGEVKEENKA ETSSEDKGCE EDVALQVGNG KGDCGNDSLK SSIDQNNISK  60
HGPILTNIKR SSAEPDSMAS SSAKKDQDDH QLDLAKAEMG EVIEENQRLR MYLDQILKDY  120
RTLQLQYQDV VQQEAAKKST SPIRDSEEES AELISLSLGM SSSDQFIKKD GSCKISRKEK  180
VDEKSEKQGS LDLGLDCKFE VPPVKPSPIG SPETSVEEIK EETAGENFPP HNTLKNIVRN  240
GDDELSQQNP AKKARVSVRV RCDTPTMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAPSCP  300
VRKQVQRCAD DMSILITTYE GTHNHPLSVS ATAMASTTSA AASMLMSGSS ISGSSGATSS  360
STLTTNSVNL NGLNFHFSDN SSSKPFYLPN SSLSSSPSYP TITLDLTNSA SSARLGNFPP  420
RYSTTNLNFS SLESNALPIS WSNGVLNYGN PPYNKNQTGS LYFGSHPQET LYQAYLQKTL  480
NPTQQPLPPD SIAAATKAIA SDPSFQSALA AALTSIIGSG GATASTAGNQ TLGDESSKNI  540
KSSTEPNFPI LSSFPSPSNA NKCAPSLLNK LPSSSSSQPG GLMFLSNPFP FPTSKSNSDS  600
PGDK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-59	WRKY family protein