PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu006434.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ARR-B | ||||||||
Protein Properties | Length: 679aa MW: 74371.7 Da PI: 6.0513 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.1 | 2e-28 | 217 | 270 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av++L G +kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl Oeu006434.2 217 KPRVVWSVELHQQFVTAVNHL-GLDKAVPKKILELMNVPGLTRENVASHLQKYRL 270 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 39.3 | 1.5e-12 | 219 | 269 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+ lG + +k+I + m+ g+t++++ s++qky+ Oeu006434.2 219 RVVWSVELHQQFVTAVNHLGLDkaVPKKILELMNvPGLTRENVASHLQKYR 269 678***********************************************7 PP | |||||||
3 | Response_reg | 75.7 | 1.7e-25 | 37 | 145 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ + +l+++l+k y ev+ + +e al++l+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a + ++ + + + Ga Oeu006434.2 37 VLVVDDDPICLLILEKMLKKCLY-EVTKCNRAELALNYLRENKngYDIVISDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADDGKKVVMKGITHGAV 131 89*********************.***************999999**********************6644.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e+l + Oeu006434.2 132 DYLIKPVRIEALKN 145 **********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 679 aa Download sequence |
MNLGGLQAVK SMSVPSSSLS RKSGDGVSDQ FPAGLRVLVV DDDPICLLIL EKMLKKCLYE 60 VTKCNRAELA LNYLRENKNG YDIVISDVHM PDMDGFKLLE HVGLEMDLPV IMMSADDGKK 120 VVMKGITHGA VDYLIKPVRI EALKNIWQHV VRKNKDEYKG KDCEQTGSVE DGEQQQKPPE 180 DAEYSSSANE GNWKNSKKRK DEEDEAEERD DTSSLKKPRV VWSVELHQQF VTAVNHLGLD 240 KAVPKKILEL MNVPGLTREN VASHLQKYRL YLRRLSGVSQ HQNGLNNAFM GPTDATFGSM 300 SSFNGIELQA LASSGQLPPQ SLAIIQAAAL GRATNKSPVP VPLVDQRNLF SFESPKLRFG 360 EDSLLNNNSK QINLLHGIPT NMEPKQLATL HQSAQSLGNL NMQLQSQSSQ SGSLLTQRPQ 420 SQPRTPLLNE INGSHVSTLP SSLGQPIMSQ ALPSSVLPRN GIENVRGGTF GSVSQPSSAL 480 DFSVNHGTEF PGNSFPLMSN SGIPILTSKG MLQEEVKSEM KVPRGYLPNY DTFDELNQNR 540 TQDWGVQTVG STFDVSQHSN LQGSLDVSPS ILVQQGFSSN LKSEQSRNIP VSKATFAVGD 600 SRAGNISNPS QQLNSSPADI SQRIKAERLP NMGFQNTFFP EQFGQDDLMS ALLKQQEGTG 660 AVESEFGFDG YHLDNLPV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-180 | ARR-B family protein |