PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu006427.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26182.4 Da PI: 5.1985 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.8 | 3.6e-20 | 75 | 123 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++ a+k+++g Oeu006427.1 75 YRGIRQRP-WGKWAAEIRDPKK---GVRVWLGTFSTAEEAARAYDDAAKRIRG 123 9*******.**********954...4************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 233 aa Download sequence |
MCGGAIISDE PIINKRGKLT TEELWAEFDT ISEFWGFNSS NGKDLLPINK PKKIKNGTND 60 KAEQKNCPRP RKNMYRGIRQ RPWGKWAAEI RDPKKGVRVW LGTFSTAEEA ARAYDDAAKR 120 IRGDKAKLNF SNNSPPSTPP TPPVQPPAKR LCVNTEPNPL MDYGIQTTQQ QEVYYPTQAV 180 ASQSFELEDE ISSLESLLGL EPAEPSQFVN TESVDSVDLW MMEDFAHNNL FF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G16770.1 | 1e-39 | ERF family protein |