PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006389.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 353aa MW: 39771.6 Da PI: 8.9953

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006389.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	33.1	1.4e-10	46	101	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++g+++A+++d ++n ++k+ + g ++ + Aa a++ a++k++g Oeu006389.1 46 IFRGVTRHRWTGKYEAHLWDkNCWNEaQKKKGRQGAYDDEAAAAHAYDLAALKYWG 101 69****************99999897766677*99***********98 PP
2	AP2	50.1	6.9e-16	144	195	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g Oeu006389.1 144 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAVAYDMAAIEYRG 195 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MAKLSQKNQT KTSSKNVAKA ATNPGMKAKR TRKTIPRDSP PQRSSIFRGV TRHRWTGKYE 60 AHLWDKNCWN EAQKKKGRQG AYDDEAAAAH AYDLAALKYW GQDTILNFPL SIYEKELKEM 120 DGRSREEYVG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY LYLGTYATQE 180 EAAVAYDMAA IEYRGINAVT NFDLSRYIKW LKPNNNEPNK SNPIDETNSP PPSNHISSGS 240 ASLDHLQPPL EDVNATFSQP RATIATSALG LLLQSSKFKE MMEMTLAAEY PGTLPESDPP 300 QSSIPEDIKT HFESNDLYAY NIQGDDFFEE LNSFMPSMVQ FDLMLNGDDL IL*

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MAKLSQKNQT KTSSKNVAKA ATNPGMKAKR TRKTIPRDSP PQRSSIFRGV TRHRWTGKYE  60
AHLWDKNCWN EAQKKKGRQG AYDDEAAAAH AYDLAALKYW GQDTILNFPL SIYEKELKEM  120
DGRSREEYVG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY LYLGTYATQE  180
EAAVAYDMAA IEYRGINAVT NFDLSRYIKW LKPNNNEPNK SNPIDETNSP PPSNHISSGS  240
ASLDHLQPPL EDVNATFSQP RATIATSALG LLLQSSKFKE MMEMTLAAEY PGTLPESDPP  300
QSSIPEDIKT HFESNDLYAY NIQGDDFFEE LNSFMPSMVQ FDLMLNGDDL IL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-101	AP2 family protein