PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006356.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C3H

Protein Properties

Length: 651aa MW: 72704.6 Da PI: 5.9838

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006356.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	19.6	1.7e-06	63	86	3	27
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 ++C ff++ G+C Gd C+F Hgp Oeu006356.1 63 VAPCIFFQK-GFCLKGDWCPFLHGP 86 689****.***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 651 aa Download sequence
MNPRDCYFWL HGNCLNLKCG FRHPPLDGLL GNQLPISAGS SIPPSQVATT SLAHVTHTSG 60 KQVAPCIFFQ KGFCLKGDWC PFLHGPNPTS NKAAQVPGTT ASAEPVTFKH GLGELENGTQ 120 ERKVPYISVL KSVELPLQAK STLEVETVHP GNKLAMSRKI QQTSGINKEF SRYRPSGPPA 180 NNGNTVSGSS RAQRPNMFEE RGGMETKDAE EISRDPSPGF DVLVDNELGD SDYYPSEDQY 240 RITRDHEERN EYGHSADYSS FADGDRDRMR THRGRDSYDS VQGHYAWEQH RVSRESTPEG 300 SAYLERRRYA RFDGPDQVDE TDLRHHLSKH RRSNGLKSVI SDEFPQDKYA KNLSYHLRRD 360 ELVPQNESSL GSRLRGRIKL TGKSSTPIDG REDLCRGREI NRGTDLGRLS PGGIHLSSHH 420 GRLEDRIEKT VEQDFRNEGK IRVPRDMTGD NNGDFAGPKT LAELKIRKKT DSSEQHVNYQ 480 QSLGKRKHSV LDGHKQTSCD LSFEGPRSLE EILKRKRGEI SGTGSGRTLS SNAEDNNPKN 540 GKDDRTKISG LKNESSPLCN NKEAFQSASG NEAGAEETRS VGASKLEAED VTIFEDDTNQ 600 KREGNEQKDY EQMDGEYYEL DEGDNGDAEE EYPEDDDGDD EFAKKMGVMY *

Sequence ? help Back to Top

Protein Sequence Length: 651 aa Download sequence

MNPRDCYFWL HGNCLNLKCG FRHPPLDGLL GNQLPISAGS SIPPSQVATT SLAHVTHTSG  60
KQVAPCIFFQ KGFCLKGDWC PFLHGPNPTS NKAAQVPGTT ASAEPVTFKH GLGELENGTQ  120
ERKVPYISVL KSVELPLQAK STLEVETVHP GNKLAMSRKI QQTSGINKEF SRYRPSGPPA  180
NNGNTVSGSS RAQRPNMFEE RGGMETKDAE EISRDPSPGF DVLVDNELGD SDYYPSEDQY  240
RITRDHEERN EYGHSADYSS FADGDRDRMR THRGRDSYDS VQGHYAWEQH RVSRESTPEG  300
SAYLERRRYA RFDGPDQVDE TDLRHHLSKH RRSNGLKSVI SDEFPQDKYA KNLSYHLRRD  360
ELVPQNESSL GSRLRGRIKL TGKSSTPIDG REDLCRGREI NRGTDLGRLS PGGIHLSSHH  420
GRLEDRIEKT VEQDFRNEGK IRVPRDMTGD NNGDFAGPKT LAELKIRKKT DSSEQHVNYQ  480
QSLGKRKHSV LDGHKQTSCD LSFEGPRSLE EILKRKRGEI SGTGSGRTLS SNAEDNNPKN  540
GKDDRTKISG LKNESSPLCN NKEAFQSASG NEAGAEETRS VGASKLEAED VTIFEDDTNQ  600
KREGNEQKDY EQMDGEYYEL DEGDNGDAEE EYPEDDDGDD EFAKKMGVMY *