PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006171.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 283aa    MW: 32028.8 Da    PI: 4.8492
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006171.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260120.21.2e-37101091100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  aCaaCk++rr+Ca+dC+lap fpa+qpk f+n+hklFG+sn+lk+lk+l+++++ +am+s+ y+A++r + PvyG++  i++l  q++ +++el+++ 
  Oeu006171.1  10 ACAACKYQRRRCASDCPLAPFFPADQPKMFQNAHKLFGVSNILKILKQLDPSQKVIAMKSIKYQANMRDKYPVYGCLVEIQQLYYQIQMAEEELHATL 107
                  7*********************************************************************************************9887 PP

       DUF260  99 ee 100
                  ++
  Oeu006171.1 108 NQ 109
                  66 PP

Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MTLKGGTGQA CAACKYQRRR CASDCPLAPF FPADQPKMFQ NAHKLFGVSN ILKILKQLDP  60
SQKVIAMKSI KYQANMRDKY PVYGCLVEIQ QLYYQIQMAE EELHATLNQL AYYRQRHQQQ  120
EISSANESLS RLQLGMAPPG NAMTIINQDN PPQYDAVTAL PITYSNNDNP CYNTEYLEAK  180
ENNVVDSLWI QQPYSNGNNS MAMQSQLSNS QHLSVQQERA QDYDEIYPFF DTIDDRQSYM  240
DSKEVYESSS ESSLKDTRQS VDQIAENELK SAAACFSLTS VN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47870.14e-60LBD family protein