PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu006171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 283aa MW: 32028.8 Da PI: 4.8492 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 120.2 | 1.2e-37 | 10 | 109 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 aCaaCk++rr+Ca+dC+lap fpa+qpk f+n+hklFG+sn+lk+lk+l+++++ +am+s+ y+A++r + PvyG++ i++l q++ +++el+++ Oeu006171.1 10 ACAACKYQRRRCASDCPLAPFFPADQPKMFQNAHKLFGVSNILKILKQLDPSQKVIAMKSIKYQANMRDKYPVYGCLVEIQQLYYQIQMAEEELHATL 107 7*********************************************************************************************9887 PP DUF260 99 ee 100 ++ Oeu006171.1 108 NQ 109 66 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MTLKGGTGQA CAACKYQRRR CASDCPLAPF FPADQPKMFQ NAHKLFGVSN ILKILKQLDP 60 SQKVIAMKSI KYQANMRDKY PVYGCLVEIQ QLYYQIQMAE EELHATLNQL AYYRQRHQQQ 120 EISSANESLS RLQLGMAPPG NAMTIINQDN PPQYDAVTAL PITYSNNDNP CYNTEYLEAK 180 ENNVVDSLWI QQPYSNGNNS MAMQSQLSNS QHLSVQQERA QDYDEIYPFF DTIDDRQSYM 240 DSKEVYESSS ESSLKDTRQS VDQIAENELK SAAACFSLTS VN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47870.1 | 4e-60 | LBD family protein |