PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005915.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 180aa    MW: 20207.2 Da    PI: 6.2416
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005915.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.41e-42261251100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+lrr+C+++Cvlapyfp ++p kf  +h++FGasn++k+l++lpe++r da+s++vyeA+ar+rdPvyG++g i +lq+q+++l+++la++k
  Oeu005915.1  26 PCAACKILRRRCVEKCVLAPYFPPNDPVKFTTAHRVFGASNIIKFLQELPESQRADAVSTMVYEANARLRDPVYGCAGAICQLQKQVNELQEQLAKAK 123
                  7***********************************************************************************************99 PP

       DUF260  99 ee 100
                  +e
  Oeu005915.1 124 AE 125
                  87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MKCSDTILTS SSISPSHPRQ TLVMSPCAAC KILRRRCVEK CVLAPYFPPN DPVKFTTAHR  60
VFGASNIIKF LQELPESQRA DAVSTMVYEA NARLRDPVYG CAGAICQLQK QVNELQEQLA  120
KAKAEIVNMH CQQTNLMALI WMEMAQSSPI SPSEQSLDNI MNFQDENNPE YLWEQPLWT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.16e-72LBD family protein