PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005393.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 522aa MW: 57465.6 Da PI: 6.8499

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005393.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.4	1.5e-35	162	267	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......ssssasec.eaesssssasnsssg.... 88 +++kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++s++++WL+++akpai+el ++ ++s++++ e+e+++++++ + + Oeu005393.1 162 TARKDRHSKVCTSKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSNAVDWLIKKAKPAIDELEQLpawnhtKFSAENAIfEQEQEQEEEQDQ--Arvvd 257 789*************************************************************665555444444445333333333311..12345 PP TCP 89 .........k 89 + Oeu005393.1 258 pniagssskR 267 5544432220 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MFARCTKSSY ASDTDGILYP RLEISLLCIP VVSLLNKGTR LGLLFSEGIR KVAVLDFAEP 60 LIPRRNPHPY RNQNQVATTS GYVEQGEGGG EESSPPPPPP PPKKRLFLNS SISFEASAEH 120 ARLQEKMEKN TRNQQIPSRL GLRNRTGGHI VEVQGGHIVR STARKDRHSK VCTSKGPRDR 180 RVRLAAHTAI QFYDVQDRLG YDRPSNAVDW LIKKAKPAID ELEQLPAWNH TKFSAENAIF 240 EQEQEQEEEQ DQARVVDPNI AGSSSKRAMT MLGNENGLQV LHQSSNADPN ASFLPSSLDS 300 DSISDTLKSF FPIGTSRTSC QSQDLRLSLQ SFQDPLMLHH HQPQPPHHKN PTHHTEEAYS 360 QPQVSFNGTS LLGLDGSYAG WSEHHQHQPT EISRFQGLTP WNTSGDITGG SGGAAGYLFT 420 WPPALQQLLG QSHFSSERGP LQSSNTPSIR AWTDPSAIGV ATADHSQHHP VVPVYSSSIS 480 GVEFTSTVGG FSEFHIPARI QVDKEEHDGY TDKPSSSDSH H*

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MFARCTKSSY ASDTDGILYP RLEISLLCIP VVSLLNKGTR LGLLFSEGIR KVAVLDFAEP  60
LIPRRNPHPY RNQNQVATTS GYVEQGEGGG EESSPPPPPP PPKKRLFLNS SISFEASAEH  120
ARLQEKMEKN TRNQQIPSRL GLRNRTGGHI VEVQGGHIVR STARKDRHSK VCTSKGPRDR  180
RVRLAAHTAI QFYDVQDRLG YDRPSNAVDW LIKKAKPAID ELEQLPAWNH TKFSAENAIF  240
EQEQEQEEEQ DQARVVDPNI AGSSSKRAMT MLGNENGLQV LHQSSNADPN ASFLPSSLDS  300
DSISDTLKSF FPIGTSRTSC QSQDLRLSLQ SFQDPLMLHH HQPQPPHHKN PTHHTEEAYS  360
QPQVSFNGTS LLGLDGSYAG WSEHHQHQPT EISRFQGLTP WNTSGDITGG SGGAAGYLFT  420
WPPALQQLLG QSHFSSERGP LQSSNTPSIR AWTDPSAIGV ATADHSQHHP VVPVYSSSIS  480
GVEFTSTVGG FSEFHIPARI QVDKEEHDGY TDKPSSSDSH H*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	3e-65	TCP family protein