PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005364.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 531aa MW: 56079.2 Da PI: 8.2867

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005364.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.1	7.4e-06	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu005364.1 49 FVCEICNKGFQREQNLQLHRRGH 71 89*******************88 PP
2	zf-C2H2	13.9	0.00017	125	147	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k + +s+ k H++++ Oeu005364.1 125 YKCERCTKIYAVHSDWKAHMKVC 147 9********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
METSSISSVE NQTTDQPAAK KRRNQPGMPD PDAEVIALSP KALLATNRFV CEICNKGFQR 60 EQNLQLHRRG HNLPWKLRQR SGNEVKKRVY VCPEISCIHH HPSRALGDLT GIKKHFCRKH 120 GEKKYKCERC TKIYAVHSDW KAHMKVCGSR EYRCDCGTLF SRKDSFITHR AFCDALAQES 180 TRSPTLEVQV VNGGSSSPTP PPLTPSSTGV LSPVLSIQSS GIFFFKSLLS PSLCFVLFLV 240 AAEFPENQTL HFQPQPGTAA LSTSITTATT TTTIAATASG VSTYNGNINS SSGVFASIFA 300 SSTLDKLAQP SRCPSSYSDL LCAMAGSECS TIDPISLSLS SSLYLSTSPA SLFPTASQDP 360 YRHYASTPQP ALSATALLQK AAQIGATSAN SSLLRGLGLA MSSSSDPQDN ISMPAAATIT 420 APSPPHWNSH MQLGNSSFDP GLGLGIPSNR SSGLNDFMIG PSTSLLSNKP TTLDFLGLGM 480 GASEGPSGEF SAFLTSIGGG LNAAAASIGG GSSSAGEAWD DPSDRKTSLL *

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

METSSISSVE NQTTDQPAAK KRRNQPGMPD PDAEVIALSP KALLATNRFV CEICNKGFQR  60
EQNLQLHRRG HNLPWKLRQR SGNEVKKRVY VCPEISCIHH HPSRALGDLT GIKKHFCRKH  120
GEKKYKCERC TKIYAVHSDW KAHMKVCGSR EYRCDCGTLF SRKDSFITHR AFCDALAQES  180
TRSPTLEVQV VNGGSSSPTP PPLTPSSTGV LSPVLSIQSS GIFFFKSLLS PSLCFVLFLV  240
AAEFPENQTL HFQPQPGTAA LSTSITTATT TTTIAATASG VSTYNGNINS SSGVFASIFA  300
SSTLDKLAQP SRCPSSYSDL LCAMAGSECS TIDPISLSLS SSLYLSTSPA SLFPTASQDP  360
YRHYASTPQP ALSATALLQK AAQIGATSAN SSLLRGLGLA MSSSSDPQDN ISMPAAATIT  420
APSPPHWNSH MQLGNSSFDP GLGLGIPSNR SSGLNDFMIG PSTSLLSNKP TTLDFLGLGM  480
GASEGPSGEF SAFLTSIGGG LNAAAASIGG GSSSAGEAWD DPSDRKTSLL *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-120	C2H2 family protein