PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005292.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 296aa MW: 32667.2 Da PI: 7.3798

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005292.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.001	122	144	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Oeu005292.1 122 YECKTCSRTFPSFQALGGHRASH 144 99**********99999998887 PP
2	zf-C2H2	14.2	0.00013	198	220	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H Oeu005292.1 198 HECSYCGAEFTSGQALGGHMRRH 220 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MEAPVDVAAG PCKDLTHIVK GVRTKRQRPQ SPIPSIIRGG GDAHCDTILG HSVRGSGSST 60 YLESISITSE DEETAECLIL LAQGHRFPPK SKTDHDQDYK FNSKKYIETS STEGNKAGIF 120 VYECKTCSRT FPSFQALGGH RASHKKPKNM ANKAFFLSDS EDDFSFTMHK NDTKISSSPP 180 LQPVNNKTNS SFHSIKVHEC SYCGAEFTSG QALGGHMRRH RGVAATNTTL SLSTPMSQSS 240 FDYYNQEYED SKKTTRNSLT LDLNLPAPED EHKQQQQKEA EFVFSTNSAL VDCHY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	3e-56	C2H2 family protein