PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005206.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 232aa    MW: 25800.2 Da    PI: 6.3645
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005206.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-1158104354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h+e+Er+RR+riN  +++Lr+ll  +      K +Ka+ L k+ve +++L
  Oeu005206.1  58 ESHKEAERKRRERINCHLDRLRSLLLCN-----SKTDKASLLAKVVERVREL 104
                  69*************************8.....7*************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MQSDNSPENS NFHHVPDGNG FIYGFPAMES YCSSSFYPME VPEFTHAPAE VRALTASESH  60
KEAERKRRER INCHLDRLRS LLLCNSKTDK ASLLAKVVER VRELKQQTSE IMQSDQTFPS  120
ESDEITVIQN ENNSADGKSL IKASLCCEDR INLFPELIEI LNSLPLSPLK AEIVTLGGRI  180
RNLIVLASDK DQADESVVAL RDALKSLILR SSYGPGEGSK RRRILGQRVI G*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16469ERKRRE
2220224KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.17e-60bHLH family protein