PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004957.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 681aa MW: 76226.5 Da PI: 6.4269

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004957.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.7	9.1e-23	128	228	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+ltpsd++++g +++ +k+a e+ +++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++v+ + +++el+ Oeu004957.1 128 FCKTLTPSDTSTHGGFSVLRKHALEClpqldMSQATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSMFVTSKRLVAGDTFVLL--RGENGELR 223 99**************************9555556679********************************************..449999 PP EEEE- CS B3 94 vkvfr 98 v+v+r Oeu004957.1 224 VGVRR 228 ***98 PP
2	Auxin_resp	91.5	1.5e-30	254	333	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+ +Pr+ s+F+++++k+++a+++++svGmR+km++ +eds+err+ Gt+vgv+d++p +W++S+WrsLk Oeu004957.1 254 ASHAITTQTLFVVYCKPRT--SQFIIRLNKYLEAIHHEFSVGMRVKMKYIEEDSPERRCIGTIVGVEDISP-QWKDSEWRSLK 333 789*************6..9*******************************************99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MAHADGVAAG GVSHGTGVQS DDLYRELWRA CAGPLMDVPC NGERVYYFPQ GHLEQLEAST 60 NLELNQQIPQ FNLPSKILCR VCHVHLLTER DTDEVYAQIT LHPEPDSTEP ISPDSCPPEP 120 PRPIVHSFCK TLTPSDTSTH GGFSVLRKHA LECLPQLDMS QATPTQDLVA KDLHGYEWRF 180 KHIFRGQPRR HLLTTGWSMF VTSKRLVAGD TFVLLRGENG ELRVGVRRVA QQQSYMPPSV 240 ISSQSMHLGV LATASHAITT QTLFVVYCKP RTSQFIIRLN KYLEAIHHEF SVGMRVKMKY 300 IEEDSPERRC IGTIVGVEDI SPQWKDSEWR SLKIQWDEPA TVLRPDRVSP WEIETFVAST 360 FVDIAPPATK IKRLRPLNLP RAGSSVSVDL SHIGNTTEVQ TNENQAFQPP KVNCNAPNNS 420 GFCSSGSHTG GMRPPTLLLN GSLNLFREST EDNKNVAVQL VLSDCNSPVS SRASDHFLEQ 480 AESSKKYENS SVCRLFGVDL RNSSYIIPPA EKVVPCPNID VQDPSYRSEA NWMKNPEASN 540 KKQCLEVEGL WKDTQIKQNF ASSSRTRIKV QMQGIAVGRA VDLTTLMGYD DLINELEKMF 600 ELKGELHPRN KWEIAYTDNE GDMMLVGDDS WPDFCKMVRR ICICSKEEVK QMKSTFKFPC 660 LSLDGEGTIP SLDSEPKPEA *

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MAHADGVAAG GVSHGTGVQS DDLYRELWRA CAGPLMDVPC NGERVYYFPQ GHLEQLEAST  60
NLELNQQIPQ FNLPSKILCR VCHVHLLTER DTDEVYAQIT LHPEPDSTEP ISPDSCPPEP  120
PRPIVHSFCK TLTPSDTSTH GGFSVLRKHA LECLPQLDMS QATPTQDLVA KDLHGYEWRF  180
KHIFRGQPRR HLLTTGWSMF VTSKRLVAGD TFVLLRGENG ELRVGVRRVA QQQSYMPPSV  240
ISSQSMHLGV LATASHAITT QTLFVVYCKP RTSQFIIRLN KYLEAIHHEF SVGMRVKMKY  300
IEEDSPERRC IGTIVGVEDI SPQWKDSEWR SLKIQWDEPA TVLRPDRVSP WEIETFVAST  360
FVDIAPPATK IKRLRPLNLP RAGSSVSVDL SHIGNTTEVQ TNENQAFQPP KVNCNAPNNS  420
GFCSSGSHTG GMRPPTLLLN GSLNLFREST EDNKNVAVQL VLSDCNSPVS SRASDHFLEQ  480
AESSKKYENS SVCRLFGVDL RNSSYIIPPA EKVVPCPNID VQDPSYRSEA NWMKNPEASN  540
KKQCLEVEGL WKDTQIKQNF ASSSRTRIKV QMQGIAVGRA VDLTTLMGYD DLINELEKMF  600
ELKGELHPRN KWEIAYTDNE GDMMLVGDDS WPDFCKMVRR ICICSKEEVK QMKSTFKFPC  660
LSLDGEGTIP SLDSEPKPEA *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.2	0.0	ARF family protein