PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004885.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Dof
Protein Properties Length: 311aa    MW: 33139.9 Da    PI: 8.4681
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004885.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.85.7e-3949107361
       zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                  +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGG+lrnvP+Ggg+rknk++
  Oeu004885.1  49 TENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKSCRRYWTKGGTLRNVPIGGGCRKNKNT 107
                  67899***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MIQELLGGSN VGLIGGERPK LSTTSGVFDG SSSPSPSPLP SSSITATTTE NLRCPRCDSS  60
NTKFCYYNNY NLTQPRHFCK SCRRYWTKGG TLRNVPIGGG CRKNKNTTII NSVGKSSAGK  120
LKTVPSETGK TGFLSGFEQH ADISTNPSIW SSPQNSHLLS LLRSDQISNP NPITVKEEGG  180
FYGSHMSFES SLSNGGLNSW SLDPVSQMVT STGLRSSFWS NNQQQIQATN GIILGEVQNN  240
GLQELYQRLR SSTYCYPEHA PVILGNVSSA PSMASSTILE SAPVAGGELG FWNTGLPPPT  300
DLATTNGAYP *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-37Dof family protein