PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004877.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 314aa MW: 34814.2 Da PI: 6.7936

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004877.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.2	1.2e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrrkC+++Cv+apyfp ++p+kf nvhk+FGasnv kll++l+ ++reda++sl+yeAe r+rdPvyG+vg+i+ lq++l+q++ +l+ +k Oeu004877.1 7 PCAACKFLRRKCTQECVFAPYFPPDNPQKFTNVHKVFGASNVAKLLNELNASQREDAVNSLAYEAEYRLRDPVYGCVGLISILQHKLKQVQLDLDNAK 104 7*********************************************************************************************9998 PP DUF260 99 ee 100 +e Oeu004877.1 105 KE 106 87 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DNPQKFTNVH KVFGASNVAK LLNELNASQR 60 EDAVNSLAYE AEYRLRDPVY GCVGLISILQ HKLKQVQLDL DNAKKELAHY IGPSAMLPII 120 NHPGFMHQHP NFGASAFQVM PYNMQSMMGV PAGLPHGALM IGDSQQQPPT QEQQILEAQQ 180 LAVVAAAREQ EMFRNYELQQ HQQQNGLVRF NSGFDTTRGS VTATGYNKMI PATAAADMPP 240 ALALGSYEGN PYGHHIQQQA EEHSHSHHPH QLELLPHELL LQQQNATIHH ETQQLQTSLP 300 PRARSDEGRS IDS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-78	LBD family protein