PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004824.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 304aa    MW: 33279.1 Da    PI: 5.0835
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004824.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.2e-18221254134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C++C++ kTp+WR gp g+ktLCnaCG++y++ +
  Oeu004824.1 221 CTHCQVQKTPQWRTGPLGPKTLCNACGVRYKSGR 254
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MECIEARALK SSFLSQTSMK ANSQVLFNDD GWCLTGINSG ACDDFPVEDL LNLDFSDKDF  60
QEGLFFNEDG QEKGVQYRNS NSSSTLSGTD EFDNVPSGEL SVPVDDLENL EWLSQFVDDS  120
TSGLSLISPG ESFMEKAGEF SENRIVPVSR PAVQNIRVPC LPLRVPVKTR SKRQRPNGKT  180
WSLSSPSLSA SESSSTTSSS IGKPKAENGS VSGGSQTLRR CTHCQVQKTP QWRTGPLGPK  240
TLCNACGVRY KSGRLFPEYR PACSPTFSQD VHSNSHRKVL EMREKKEIVE VTDAGLTPVD  300
PFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.28e-56GATA family protein