PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004770.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 319aa    MW: 36653.6 Da    PI: 7.1024
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004770.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS263.76.2e-81931575373
         GRAS  75 seelaalklfsevsPilkfshltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerL 165
                  +ee+ a++ +++vsP+++f+h+taNqaIlea+e+e     +++HiiDfdis+G+QWp+L+q+L++ +  ++  sl+iTg+g+    + eel+et+ rL
  Oeu004770.1   9 EEEFLAFTELYKVSPFYQFAHFTANQAILEAFEREepnnnRALHIIDFDISYGFQWPSLMQSLSETAtiSNRISLKITGFGR----NLEELQETETRL 102
                  577788899************************9988887899*********************988778888*********....99********** PP

         GRAS 166 akfAeel.gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                   +fA+++ ++ fef+ l ++  + +   +L+ k++E++aVnlv++l +l   s s    ++e+Lk v sl+P +vv+veqe +++ ++Fl rf+e+l+
  Oeu004770.1 103 VSFARSFcNLVFEFHGL-VSGSKHV---KLKKKKNETVAVNLVFHLNSLN--SFSE---ISETLKYVHSLNPSIVVLVEQEGSRSPHNFLSRFMESLH 191
                  *****9559*******7.5555555...8999*************99997..3333...558************************************ PP

         GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllr......kvksdg....y 349
                  y++alfdsl+  lpr+s er  +E+  lg+ei+ v    +++ +  r e++++W+ r+e+ GF+ +  s+k ++qaklllr       +++dg    +
  Oeu004770.1 192 YFAALFDSLDDCLPRDSAERFRIEKNHLGKEIKYVMNSDKENeKSPRFEKMQTWKGRMENHGFSGLIQSSKSVMQAKLLLRirnhcsATYFDGenggF 289
                  *********************************9998766543899**********************************833222211223333358 PP

         GRAS 350 rveee..sgslvlgWkdrpLvsvSaW 373
                  rv e+   +s+ lgW+++ L+++S+W
  Oeu004770.1 290 RVFERdnGNSISLGWQEKLLLTASSW 315
                  876653244555************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MIMKTPTPEE EFLAFTELYK VSPFYQFAHF TANQAILEAF EREEPNNNRA LHIIDFDISY  60
GFQWPSLMQS LSETATISNR ISLKITGFGR NLEELQETET RLVSFARSFC NLVFEFHGLV  120
SGSKHVKLKK KKNETVAVNL VFHLNSLNSF SEISETLKYV HSLNPSIVVL VEQEGSRSPH  180
NFLSRFMESL HYFAALFDSL DDCLPRDSAE RFRIEKNHLG KEIKYVMNSD KENEKSPRFE  240
KMQTWKGRME NHGFSGLIQS SKSVMQAKLL LRIRNHCSAT YFDGENGGFR VFERDNGNSI  300
SLGWQEKLLL TASSWCCV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.13e-54GRAS family protein