PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004280.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 302aa MW: 33692.4 Da PI: 8.0829

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004280.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43	8e-14	91	142	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ Oeu004280.1 91 QRMTHITVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKDLE 142 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MALEALSSNE LLNFIIYDSI SAAPYSCNDS SDTTSLLPQE NVGGCSSMAR LNHPPVVVET 60 TQKPQDLAVQ SRKKRRRRPK VCKNKEEAET QRMTHITVER NRRKQMNEHL AVLRSLMPES 120 YVQRGDQASI VGGAIEFVKD LEHVLQSLEA KKFSLLQHAA TAENGGANHN TNDSIKVLTN 180 NPFAQFFSYP QFSCSNLPNK YTSQNKAAIA DIEVTLIETH ANIRILSRRR IRQHSKIVAA 240 FQTMFLSILH LNVTTLDPLV LYSISAKVED GCQLNSADEM AGAVHRMLRI IEEEVILCCQ 300 S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	78	RKKRRRR
2	73	78	KKRRRR
3	92	103	RMTHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-73	bHLH family protein