PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu004265.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 274aa MW: 31376.5 Da PI: 8.7873 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.4 | 1.2e-30 | 19 | 68 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fs +g+lyey+ Oeu004265.3 19 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSARGRLYEYA 68 79***********************************************8 PP | |||||||
2 | K-box | 97.2 | 2.5e-32 | 86 | 168 | 3 | 85 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 +s++ s +ea+a+ +qqe++kL+++i+n+q+++R++lGe+L+ Lsl+eL++Le+++e+++++iRskKnell+++ie++qk+ Oeu004265.3 86 SSNNGSISEANAQFYQQEASKLRQQISNMQNQNRNMLGESLGALSLRELKNLETKVERGISRIRSKKNELLFAEIEYMQKRVS 168 3444559*************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MALQSDQSRK ISRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALVVFSA 60 RGRLYEYANN SVKETIERYK KACSDSSNNG SISEANAQFY QQEASKLRQQ ISNMQNQNRN 120 MLGESLGALS LRELKNLETK VERGISRIRS KKNELLFAEI EYMQKRVSVL LTMASYRYLA 180 GREVICEGEV DLHHNNQYLR AKIAETERAQ QHMSLMPGNS DYELVQPQPF DARNYLQVNG 240 LQPNDDYPTQ DQPPLQLVLI SKDRPEEVDY LAS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-114 | MIKC_MADS family protein |