PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004014.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 322aa MW: 36630.1 Da PI: 7.5309

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004014.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	160	179	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ Oeu004014.1 160 FSCPVCFKTFNRYNNMQMHM 179 89*****************9 PP
2	zf-C2H2	14.7	9e-05	244	266	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ Oeu004014.1 244 FMCRKCGKAFAVRGDWRTHEKNC 266 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MTDNPCSNFY TDWYRFNPLH HFSTKSPPHY LMSSPYIHNL YSSNSQTPPS SSPVREALPL 60 LSLSPTRNNE EKQEPFWNSD MDLDKNKETE DRVTAVDNEG VTVALHIGLP NPSAADLASI 120 LSETTTKDEE SDVSGYPINR LKGQYWIPTP SQILIGPTQF SCPVCFKTFN RYNNMQMHMW 180 GHGSQYRKGP ESLRGTQPTG MLRLPCYCCS PGCKNHIDHP RAKPLKDFRT LQTHYKRKHG 240 TKPFMCRKCG KAFAVRGDWR THEKNCGKLW YCICGSDFKH KRSLKDHIKA FGYGHGALGI 300 DGFEEEDEPA SEIEQDDESM Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-142	C2H2 family protein