PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu003803.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 103aa MW: 11683.6 Da PI: 10.2334 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 62.6 | 8.2e-20 | 12 | 90 | 86 | 162 |
GRAS 86 evsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetg 162 sP+ k+ ++ N++I +++++rvH+i f+i +G+QWp++lq + + ++gpp++RiT ++ p++g +e++ee+g Oeu003803.1 12 AKSPFRKILSFALNKTIELKAKNATRVHVIYFGILYGFQWPTFLQHIVESNNGPPRVRITCIEFPQPGfkLAERIEEIG 90 459*************************************************************999876666666665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 103 aa Download sequence |
MNSESQSFRN FAKSPFRKIL SFALNKTIEL KAKNATRVHV IYFGILYGFQ WPTFLQHIVE 60 SNNGPPRVRI TCIEFPQPGF KLAERIEEIG VLGIYLNMHG GI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G37650.1 | 4e-26 | GRAS family protein |