PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu003754.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ARR-B | ||||||||
Protein Properties | Length: 687aa MW: 76837.6 Da PI: 7.148 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.1 | 2e-28 | 217 | 270 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av++L G +kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl Oeu003754.1 217 KPRVVWSVELHQQFVTAVNHL-GLDKAVPKKILELMNVPGLTRENVASHLQKYRL 270 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 39.3 | 1.5e-12 | 219 | 269 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+ lG + +k+I + m+ g+t++++ s++qky+ Oeu003754.1 219 RVVWSVELHQQFVTAVNHLGLDkaVPKKILELMNvPGLTRENVASHLQKYR 269 678***********************************************7 PP | |||||||
3 | Response_reg | 77.3 | 5.4e-26 | 37 | 145 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+++le+ y ev+ + +e al +l+e++ +D+++ D+ mp+mdG++ll+ e +lp+i+++a ++++ + + + Ga Oeu003754.1 37 VLVVDDDPTCLRILEKMLENCLY-EVTKCNRAELALSYLRENKnvYDIVISDVHMPDMDGFKLLEYVGLEM-DLPVIMMSADDSKKVVMKGITHGAV 131 89*********************.***************999999**********************6644.8************************ PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e++ + Oeu003754.1 132 DYLIKPVRIEAMKN 145 ********999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 687 aa Download sequence |
MNLGGSQAVK SMSVSSSSVT RKSGDGVSDQ FPAGLRVLVV DDDPTCLRIL EKMLENCLYE 60 VTKCNRAELA LSYLRENKNV YDIVISDVHM PDMDGFKLLE YVGLEMDLPV IMMSADDSKK 120 VVMKGITHGA VDYLIKPVRI EAMKNIWQHV VRKKKVEYKG KEYEQTGCVE DGEQQQKPPE 180 DAEYSSSANE GSWKNPKKRK DEEEEAEERD DPSTLKKPRV VWSVELHQQF VTAVNHLGLD 240 KAVPKKILEL MNVPGLTREN VASHLQKYRL YLRRLSGVSQ HQSGLNNAFM GPTDSTFGPM 300 SSLNGLDLQV LAASGQLPPQ NLATIQAASF GQATNKSPVP VHLVDQRNLF SFESPKLRFG 360 EDSQLLNNNS KQINLLHGIP TNMEPKQLAT LRQSAKSRFL PPLSSPGFFS SSPFSLFLLS 420 VPSSFFLIHP TSNLVSELNL GSSTLNMDPS QFDALTRQIA AIQTQMTATL EESMSILTSK 480 GMLQEEVNSE MKMPRGYLPN YDTSDELNQN RTQDWGMQNV GSTFDVSQHS NIQGSLDVLP 540 SILVQQGIGN TSNPGHPLNL SLADISQRIK SERLPNMGFQ NTFFSEQFGQ DDLMSALLKQ 600 ASSFLNLGKN SKKAQELLKA GLDLMDITWI IFLCNTFPCC SLLRLALSWS HSPDQRLKIQ 660 FDVCFQKWIS YNRRRRREMC KAYAKF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 194 | 200 | KNPKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-152 | ARR-B family protein |