PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu003567.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 156aa MW: 16915.3 Da PI: 5.9264 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 43.8 | 7.5e-14 | 2 | 54 | 44 | 96 |
DUF260 44 kllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 ++++a+pe++r+ +++sl++eA r+ +Pv+Gavg++++++++++q+++e++l Oeu003567.1 2 SFISAVPENQRPSVFRSLLFEAAGRTVNPVNGAVGLLWSGNWHVCQEAVETVL 54 6899********************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MSFISAVPEN QRPSVFRSLL FEAAGRTVNP VNGAVGLLWS GNWHVCQEAV ETVLCGGALR 60 PIPELTSNDS VADDADPCLN SRSKLLKRRR FPDEPAKITQ LADLDISLIP CLQSKKNSPL 120 PEKRQLGSPM NSEESVTTVC GDQQASEPKL LNLFK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67420.1 | 1e-35 | LBD family protein |