PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu003325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 130aa MW: 15314.5 Da PI: 11.3075 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.5 | 1.6e-13 | 25 | 70 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ed +l+ +v q+G g W Ia++m gR +kqc++rw+++l Oeu003325.1 25 GQWIGKEDRRLISLVIQFGLGKWVVIAEEMV-GRVGKQCRERWNNHL 70 677778*************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 47.7 | 3.6e-15 | 78 | 118 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT++E+ l++a++ G++ W+ Ia+++ gRt +++k++w+ Oeu003325.1 78 IWTEDEERWLIQAHEGQGNR-WAEIAKYIS-GRTKNSIKNHWN 118 6*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MAAPVNPDWK EKRGGSSSSR YQIKGQWIGK EDRRLISLVI QFGLGKWVVI AEEMVGRVGK 60 QCRERWNNHL RPHIKKDIWT EDEERWLIQA HEGQGNRWAE IAKYISGRTK NSIKNHWNAT 120 KRRQISRRR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11050.1 | 4e-49 | MYB family protein |