PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu003282.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 430aa MW: 47427.4 Da PI: 7.4029

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu003282.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.6	7.8e-06	49	94	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +++C++++++++ +C +++ lC+dC H + H+++p+ Oeu003282.2 49 QQICDNCGSEPVCTHCATDNLVLCQDCDWDAHGScvvsaaHDRSPI 94 789*************************999954888888888775 PP
2	CCT	63.3	7.2e-22	381	425	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 R +a++RYkeK+ktR+++K+irYesRKa+A++R RvKGrFvk++e Oeu003282.2 381 RGKAMQRYKEKKKTRRYDKHIRYESRKARADTRTRVKGRFVKASE 425 7789**************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MEGKSRVACD FCSDQVAVLY CRADLAKLCL SCDHHVHSAN DLSKKHLRQQ ICDNCGSEPV 60 CTHCATDNLV LCQDCDWDAH GSCVVSAAHD RSPIQPFSGC LSALDLAAAW GLEIEDRKLT 120 HQLSSSDNYG LDTGLLESWI CKDGDVPSSM MLQELMVPND NSVFYSNYSG DGLVTKKRIP 180 TCGKQKQVIL KQLKELCKRG LSDDCGGSGG GGGREEAVPG TPSGSESCGW HHGNVSWQQN 240 RDFTSLLKMQ TAPEDPKENY RMMEGSMWNA GTSSDHGAQM WDFNLGKLRV EEYIASDMEC 300 MVKNYGQPLK QENQTLGRGP ATSESSNLPA SRPSSCSGYT KPKSYVASED IHFMDHSILV 360 KNDNATAAIT KADMELLAKN RGKAMQRYKE KKKTRRYDKH IRYESRKARA DTRTRVKGRF 420 VKASEAPNV*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MEGKSRVACD FCSDQVAVLY CRADLAKLCL SCDHHVHSAN DLSKKHLRQQ ICDNCGSEPV  60
CTHCATDNLV LCQDCDWDAH GSCVVSAAHD RSPIQPFSGC LSALDLAAAW GLEIEDRKLT  120
HQLSSSDNYG LDTGLLESWI CKDGDVPSSM MLQELMVPND NSVFYSNYSG DGLVTKKRIP  180
TCGKQKQVIL KQLKELCKRG LSDDCGGSGG GGGREEAVPG TPSGSESCGW HHGNVSWQQN  240
RDFTSLLKMQ TAPEDPKENY RMMEGSMWNA GTSSDHGAQM WDFNLGKLRV EEYIASDMEC  300
MVKNYGQPLK QENQTLGRGP ATSESSNLPA SRPSSCSGYT KPKSYVASED IHFMDHSILV  360
KNDNATAAIT KADMELLAKN RGKAMQRYKE KKKTRRYDKH IRYESRKARA DTRTRVKGRF  420
VKASEAPNV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28050.1	3e-97	CO-like family protein