PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu003265.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | GRAS | ||||||||
Protein Properties | Length: 111aa MW: 12633.3 Da PI: 6.0543 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 71.2 | 2e-22 | 3 | 109 | 176 | 290 |
GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273 fe ++ + k++ ++++++L++++gEal V++ h+l+d +++ ++ +++l++ lsP+v+++veqe+ h ++sFl+r++++l+yys++f+sl a Oeu003265.1 3 FELHP-MDKKFGSIDFSMLQIRKGEALSVHWLQ--HSLYDTTGPDRN----TMRLLQCLSPRVITLVEQEIGH-GGSFLDRLASSLHYYSTIFNSLGA 92 99999.799***********************9..999999999988....**********************.789********************* PP GRAS 274 klpreseerikvErell 290 l ++++ + vE+ ll Oeu003265.1 93 FLDSDDSSHHDVEHCLL 109 *******9999998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MYFELHPMDK KFGSIDFSML QIRKGEALSV HWLQHSLYDT TGPDRNTMRL LQCLSPRVIT 60 LVEQEIGHGG SFLDRLASSL HYYSTIFNSL GAFLDSDDSS HHDVEHCLLY * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 4e-33 | GRAS family protein |