PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu003118.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 346aa MW: 39383.4 Da PI: 7.0697

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu003118.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.2	2.3e-14	44	103	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a + a++k++g Oeu003118.1 44 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDNEEAAAHAFDLAALKYWG 103 57*****************999955656446***********************98 PP
2	AP2	53.2	7.4e-17	146	198	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg+f t eeAa a++ a+ +++g+ Oeu003118.1 146 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTFATQEEAAIAYDMAAIEYRGH 198 89**99******99966...3.6************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MAKNSKKNLK KSSTSTSTDD NNDTTKVKRT RKSVPRESPQ RRSSIYRGVT RHRWTGRYEA 60 HLWDKNCWNE SQNKKGRQVY LGAYDNEEAA AHAFDLAALK YWGQETLLNF HFSTYEKELK 120 EMEDQSKAEY IGSLRRKSSG FSRGASKYRG VARHHHNGRW EARIGRVFGN KYLYLGTFAT 180 QEEAAIAYDM AAIEYRGHEA VTNFDISRYI SYLKPKQCDT SNNPDLNGPV DITHMQNSDE 240 EIHDHHHLKI SSGHHETTVK PPRLENGTTC PSTLGILLQS SKFKELVEQT AACDSPSTSE 300 PEPPRSSFPD DIQTSFDFQD SSSNFAEEYD IIFGDLNSFQ CELDA*

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MAKNSKKNLK KSSTSTSTDD NNDTTKVKRT RKSVPRESPQ RRSSIYRGVT RHRWTGRYEA  60
HLWDKNCWNE SQNKKGRQVY LGAYDNEEAA AHAFDLAALK YWGQETLLNF HFSTYEKELK  120
EMEDQSKAEY IGSLRRKSSG FSRGASKYRG VARHHHNGRW EARIGRVFGN KYLYLGTFAT  180
QEEAAIAYDM AAIEYRGHEA VTNFDISRYI SYLKPKQCDT SNNPDLNGPV DITHMQNSDE  240
EIHDHHHLKI SSGHHETTVK PPRLENGTTC PSTLGILLQS SKFKELVEQT AACDSPSTSE  300
PEPPRSSFPD DIQTSFDFQD SSSNFAEEYD IIFGDLNSFQ CELDA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	2e-99	AP2 family protein