PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu003079.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 422aa MW: 47231.4 Da PI: 8.3731

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu003079.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53.3	5e-17	303	350	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eYIksLq Oeu003079.1 303 KVHNLSERRRRDRINQKMRALQELIPHS-----NKSDKASMLDEAIEYIKSLQ 350 56***********************7.....59***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MDNPIPGWSI ETELPVSDQN KSFGVDNGLL ELLWQNGQVV LNSQSHQKPG YGNDEWRERR 60 KQSSGNQSDL IEVDVTDSWI HCPIDESFQK EIFWQFEGNK FLSPNPLPPP SFETGHQSSK 120 QHQNSGQNVC RFRGQGEHSI MTVGSSHCGS NQVVNDVRMS RAAAGKNYCG KLSPQSESLE 180 IVTLETAITT SSGGSGSSFG KTTCNQSTDN NSHKEKQRWR RYRMPKYVLG SSDGSRNLSE 240 LGRIQASDHL IYMENKFPRE PAQVATMACW GLALPLLAIE LESAEGKKSS QKSATTRKSR 300 ASKVHNLSER RRRDRINQKM RALQELIPHS NKSDKASMLD EAIEYIKSLQ LQVQSSNPVL 360 NLANYQNRTQ NPIFHDQYVN SMTFHPLQNS SHPMNMFNFV SHTSQQNYMQ PPSADGNGST 420 G*

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MDNPIPGWSI ETELPVSDQN KSFGVDNGLL ELLWQNGQVV LNSQSHQKPG YGNDEWRERR  60
KQSSGNQSDL IEVDVTDSWI HCPIDESFQK EIFWQFEGNK FLSPNPLPPP SFETGHQSSK  120
QHQNSGQNVC RFRGQGEHSI MTVGSSHCGS NQVVNDVRMS RAAAGKNYCG KLSPQSESLE  180
IVTLETAITT SSGGSGSSFG KTTCNQSTDN NSHKEKQRWR RYRMPKYVLG SSDGSRNLSE  240
LGRIQASDHL IYMENKFPRE PAQVATMACW GLALPLLAIE LESAEGKKSS QKSATTRKSR  300
ASKVHNLSER RRRDRINQKM RALQELIPHS NKSDKASMLD EAIEYIKSLQ LQVQSSNPVL  360
NLANYQNRTQ NPIFHDQYVN SMTFHPLQNS SHPMNMFNFV SHTSQQNYMQ PPSADGNGST  420
G*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	309	314	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-27	bHLH family protein