PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu002670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 113aa MW: 12727.8 Da PI: 10.0632 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 73 | 5.7e-23 | 13 | 61 | 1 | 49 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal 49 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfa vhk+FGasnv k+l+ Oeu002670.1 13 PCAACKLLRRRCAHDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQVR 61 7********************************************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MKESSRKQGT ASPCAACKLL RRRCAHDCVF APYFPADEPQ KFASVHKVFG ASNVNKMLQV 60 RPLPHTHSPS PPLYLYLHTQ RLYEALAGPR TIFPYIYLVE VKSHSVENMK RA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 7e-37 | LBD family protein |