PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu002666.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 242aa    MW: 27200.5 Da    PI: 9.6155
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu002666.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000156183123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C+ C++ Fs++  L  H++ H
  Oeu002666.1 61 FTCSFCKREFSTSQALGGHQNAH 83
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
METLDKAMKM KEKVVERGSE SKVEDESTSR VVLDLELFNS GSFRANESSN EEGRRLKPKV  60
FTCSFCKREF STSQALGGHQ NAHKQERASA KKRHGLVMEV AAPPPLLAGG RPRYPYHPYS  120
NFANHHQIIP FYGTLDRSVD SVRSDSMIHK QYNPRFSSSH EKLSRSFFMN ERLLTHHQMN  180
AGFGHEKSER GSAALVLRLN SMDNTAPIKA MESNINNQEL RPGHSNNDQT DASGLDLNLK  240
L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.12e-15C2H2 family protein