PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu002541.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 315aa    MW: 35930.3 Da    PI: 6.658
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu002541.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding491.4e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W+ eEd +l+ + +++G+g +W + ++++g++R++k+c++rw++yl
      Oeu002541.1 14 RGPWSSEEDAKLKTYMEKYGTGgNWIALPQKIGLNRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
2Myb_DNA-binding39.21.7e-1269111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T+eEd ++  +    G++ W+ Ia+ ++ gRt++++k++w++
      Oeu002541.1  69 GGFTEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                      569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MGRAPCCDKD NVKRGPWSSE EDAKLKTYME KYGTGGNWIA LPQKIGLNRC GKSCRLRWLN  60
YLRPNLKHGG FTEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR  120
HKQPHRNRLS ISGRDSNGID DSQNFQNLSM TTLERLQLHM QIKTLQNPFC LYYNPALMVQ  180
NFQFLEENQD ILMQQDYFNL SNLKEDELGN SINGIPSTEN ISGQSNTNTN TGIQPSSTFI  240
QAELDVGFIP AQNSMVVDEF QCFKEIDGSK LYNPRWLSNE FDVNLASSNS WDSANVLHKP  300
EEMCQNYSTG YSIQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.12e-91MYB family protein