PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu002410.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 329aa MW: 36505.4 Da PI: 7.3876

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu002410.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.8	1.2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ ++++G g+W++ ++ g++R++k+c++rw +yl Oeu002410.1 14 KGPWTPEEDDKLIKHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	56.7	5.5e-18	67	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ ++++++ lG++ W++Ia +++ gRt++++k++w+++l Oeu002410.1 67 RGKFSQEEEQTILNLHAILGNNKWSAIATHLP-GRTDNEIKNFWNTHL 113 89****************************.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MGRSPCCDES GLKKGPWTPE EDDKLIKHIQ KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQEEEQTILN LHAILGNNKW SAIATHLPGR TDNEIKNFWN THLKKKLIQM 120 GFDPMTHRPR TEIFSSLPHL IALANLKEVI ENPSWEDQAI RFQTEAVQMA RLNQYLQGLL 180 QPPSSMAANF QNNLNAINPN MVLNTPYLEL PTPLPSLANN NTNFQAIIDS IPFSHMPDLQ 240 APCSLQTSLN RDMVHAGSHF GVLNQGENSH SSPWLPPTIS PSPSAAAAAP PMTETSNTNT 300 ADACSPSSYE GAPLWSGLLD YPLFHEIA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-101	MYB family protein