PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu002302.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 210aa MW: 24189.3 Da PI: 8.0574 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79.3 | 2.7e-25 | 9 | 56 | 1 | 48 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ viifs +gk++e Oeu002302.1 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVIIFSAHGKIFE 56 79*******************************************998 PP | |||||||
2 | K-box | 55.8 | 2e-19 | 80 | 173 | 7 | 99 |
K-box 7 ks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ +++++ l+ e++kLk ei+ Lq+ +R + G + +s++l e++ Le++Le + ++Rs K+++++++i+ l++ke+ l+ +n++L+ k++ Oeu002302.1 80 EQvVKDKEVVDLKDEISKLKLEIDVLQKGIRFIFGGGNDSMTLDEMNVLEKHLELWMCHVRSAKMDIMFQEIQLLKNKEEILKAANEYLQYKMN 173 3348899999********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MARGKIQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGVIIFSA HGKIFEQASK 60 GAMQGLIERY MKNNRGTQAE QVVKDKEVVD LKDEISKLKL EIDVLQKGIR FIFGGGNDSM 120 TLDEMNVLEK HLELWMCHVR SAKMDIMFQE IQLLKNKEEI LKAANEYLQY KMNEQYGIDS 180 IAPMLTDIEY PLMTNNQFPL TIQNEIYQF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 7e-69 | MIKC_MADS family protein |