PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu002214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 303aa MW: 34309.9 Da PI: 6.9042 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.4e-18 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l+++++ +G g+W++ a + g++Rt+k+c++rw++yl Oeu002214.1 23 RGPWTVEEDFTLINYIAHHGEGRWNSLATCAGLRRTGKSCRLRWLNYL 70 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.7 | 3.6e-15 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE+ +++++ ++G++ W++Ia++++ gRt++++k++w++ Oeu002214.1 76 RGNLTLEEQVMILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MEHHVKGGGS YNQSEEELME LRRGPWTVEE DFTLINYIAH HGEGRWNSLA TCAGLRRTGK 60 SCRLRWLNYL HPDVRRGNLT LEEQVMILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKHAKQLKC DVNSKQFKDN LRYLWMPRLV ERIQAGAAST GPTVGTFSTT TATNNHSGTI 180 TAANYHLNKT NLDMGSSRMV LPQPNMAGNF SGGVQINPSN YAPETSCNAA SSDSFGAQVS 240 PVSDLTDCYN YPANHNNNQD YFPPSELSYQ ESFSQGLDFN NSNWMDGGDS WDLDDVWKFL 300 QQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 5e-85 | MYB family protein |