PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001989.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 617aa MW: 70427.4 Da PI: 7.0445

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001989.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0015	374	396	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C +rk++L+rH+r++ Oeu001989.1 374 FFCEFCLNFMKRKEQLQRHMRKC 396 67*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MTLGSHEEFM HRHILSCDLS YACSYFGHSF SEHGRSFNST TPVMGSLVSD IVSEHLFFKG 60 VHPGACVFIA GAHLIYSFFK GDKNLDCNST LFFFKNVLFS GPLEKSNQLS LGGREDLDTD 120 LFLKVAAEGE PWSALRFDRF GKIVSVEGVT SETLRVSGGH LVWCSGEIIG GRSHFEKTSD 180 TLTTTEKGAT HTSVNGQAAA VGAGVLYVAE SNGTQMEIDV SRRRRMTMLP LEVGTRVLCR 240 WRDGKYHAVK VIERRKLPGG GGNDYEYYVH YNEFNRRLDE WVKLEQLDLD SVETVVDEKV 300 EDKVTSLKMT RHQKRKIDET HVEGHEELDA ASLREHEEFT KVKNIATIEL GRYEIETWYF 360 SPFPPEYNEC TKLFFCEFCL NFMKRKEQLQ RHMRKCDLKH PPGDEIYRSG TLSMFEVDGK 420 KNKVYGQNLC YLAKLFLDHK TLYYDVDLFL FYVLCECDDR GCHMVGYFSK EKHSEESYNL 480 ACILTLPPYQ RKGYGKFLIA FSYELSKKEG KVGTPERPLS DLGLLSYRGY WTRVLLDILK 540 KHKGNISIKE LSDMTAIKAE DILTTLQSLE LIQYRKGQHV ICADPKVLDR HLKAAGRGGL 600 DVDVCKLIWT PYKEQN*

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MTLGSHEEFM HRHILSCDLS YACSYFGHSF SEHGRSFNST TPVMGSLVSD IVSEHLFFKG  60
VHPGACVFIA GAHLIYSFFK GDKNLDCNST LFFFKNVLFS GPLEKSNQLS LGGREDLDTD  120
LFLKVAAEGE PWSALRFDRF GKIVSVEGVT SETLRVSGGH LVWCSGEIIG GRSHFEKTSD  180
TLTTTEKGAT HTSVNGQAAA VGAGVLYVAE SNGTQMEIDV SRRRRMTMLP LEVGTRVLCR  240
WRDGKYHAVK VIERRKLPGG GGNDYEYYVH YNEFNRRLDE WVKLEQLDLD SVETVVDEKV  300
EDKVTSLKMT RHQKRKIDET HVEGHEELDA ASLREHEEFT KVKNIATIEL GRYEIETWYF  360
SPFPPEYNEC TKLFFCEFCL NFMKRKEQLQ RHMRKCDLKH PPGDEIYRSG TLSMFEVDGK  420
KNKVYGQNLC YLAKLFLDHK TLYYDVDLFL FYVLCECDDR GCHMVGYFSK EKHSEESYNL  480
ACILTLPPYQ RKGYGKFLIA FSYELSKKEG KVGTPERPLS DLGLLSYRGY WTRVLLDILK  540
KHKGNISIKE LSDMTAIKAE DILTTLQSLE LIQYRKGQHV ICADPKVLDR HLKAAGRGGL  600
DVDVCKLIWT PYKEQN*