PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001478.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 322aa MW: 36396.9 Da PI: 7.4354

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001478.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.7e-15	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ + G g+W+ +ar g+ R++k+c++rw +yl Oeu001478.1 23 KGLWSPEEDEKLMNYMVRNGQGCWSDVARNAGLQRCGKSCRLRWINYL 70 678*******************************************97 PP
2	Myb_DNA-binding	49	1.4e-15	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ +E++l+++++ +lG++ W+ Ia++++ gRt++++k++w++ Oeu001478.1 76 RGAFSSQEEDLIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 119 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MRKPDSFGRS GCTAITTASK LRKGLWSPEE DEKLMNYMVR NGQGCWSDVA RNAGLQRCGK 60 SCRLRWINYL RPDLKRGAFS SQEEDLIIHL HSLLGNRWSQ IAARLPGRTD NEIKNFWNST 120 IKKRLKNISS SSSRSPNTSD SSMEQPRDGI NGGLRSNQEP NMMGVYMHPS SSSTWQLPNF 180 ALNPMNLHHI LDQQPPGIVG SHFDVQPCNT QSGMFGGNID FEGQFMVPPL ENINTEQSGK 240 MGNFVEKNNA NVINNMNSIT NYNQCNNNKD NINNRLVENN VKIEGLCWEG DDLRMAMGEW 300 DLEELMKDVS LFPFLDSIRQ Y*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	8e-69	MYB family protein