PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001261.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 511aa MW: 56058.6 Da PI: 9.5258

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001261.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H Oeu001261.1 63 FICEICNKGFQRDQNLQLHRRGH 85 89*******************88 PP
2	zf-C2H2	11.8	0.00072	140	162	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + Oeu001261.1 140 WKCEKCSKKYAVQSDWKAHSKIC 162 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MMSDDGISSS IGGFIQDPTL NPNPNSSNSN QAKRKRNLPG TPGKNNAEVI ALSPKSLMAT 60 NRFICEICNK GFQRDQNLQL HRRGHNLPWK LKQRNNKEVI RKKVYICPEK TCVHHDPSRA 120 LGDLTGIKKH YSRKHGEKKW KCEKCSKKYA VQSDWKAHSK ICGTREYKCD CGTLFSRKDS 180 FITHRAFCDA LAEESARFTS VPSANVSFRN ELLSNIQSAG SSQFSGVFRP ELTGLEHGNQ 240 LNLDLQKPRL PVWLENANSH LNSVGNPTGS NAFLGSSSTS LPELVQMASQ NQWFGRGQEV 300 PFTGGNSSSS ALNRVLKEEE ENKGNLTENI SSLYYNNTHN QPETNLPAPM SATALLQKAA 360 QMGSTRSSSA IFGTGFGLMS SSFSSLGNFN SFNQSRNEVQ NLEKAENLNG LMASSCASTM 420 STNRGGGFFR GDIPTTPIMG SSRNSDPAMM MPNITGNQNQ STGTEATNSL TRDFLGVEGS 480 EHRQFLQQNE LSKFALMGSA MDSSHYSKNH *

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MMSDDGISSS IGGFIQDPTL NPNPNSSNSN QAKRKRNLPG TPGKNNAEVI ALSPKSLMAT  60
NRFICEICNK GFQRDQNLQL HRRGHNLPWK LKQRNNKEVI RKKVYICPEK TCVHHDPSRA  120
LGDLTGIKKH YSRKHGEKKW KCEKCSKKYA VQSDWKAHSK ICGTREYKCD CGTLFSRKDS  180
FITHRAFCDA LAEESARFTS VPSANVSFRN ELLSNIQSAG SSQFSGVFRP ELTGLEHGNQ  240
LNLDLQKPRL PVWLENANSH LNSVGNPTGS NAFLGSSSTS LPELVQMASQ NQWFGRGQEV  300
PFTGGNSSSS ALNRVLKEEE ENKGNLTENI SSLYYNNTHN QPETNLPAPM SATALLQKAA  360
QMGSTRSSSA IFGTGFGLMS SSFSSLGNFN SFNQSRNEVQ NLEKAENLNG LMASSCASTM  420
STNRGGGFFR GDIPTTPIMG SSRNSDPAMM MPNITGNQNQ STGTEATNSL TRDFLGVEGS  480
EHRQFLQQNE LSKFALMGSA MDSSHYSKNH *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	103	KLKQRNNKEVIRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-105	C2H2 family protein