PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu001006.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 161aa    MW: 17806.2 Da    PI: 4.4037
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu001006.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB76.44.2e-241194386
        NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvy 86
                 ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c+re++kti+++ +l al  lGf +y+e++ + 
  Oeu001006.1 11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCNREDKKTIAPEHVLKALEGLGFGEYIEEVYAA 94
                 6899***************************************************************************98654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MEPMDIVGKT KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLISSESNE  60
VCNREDKKTI APEHVLKALE GLGFGEYIEE VYAAYEQHKL ETVDTVRTGK LSNVAEMTEE  120
QALAEQQRMF AEARARMNGG ITVPKQSDPE PQGPQPSLNT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.45e-92NF-YB family protein