PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu000419.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 552aa MW: 60869 Da PI: 5.0314

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu000419.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.6	5.6e-12	236	292	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g Oeu000419.1 236 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 292 78*****************433.44555535555.779999************98 PP
2	AP2	46.5	9e-15	337	386	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Oeu000419.1 337 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 386 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MSNWLGFSLT PHLRVDDEEE AFGRDENPSQ DENAQEGCFQ TPISIMPLRS DGSLCALEPY 60 RRSNGTDEWS METANPTGEG PKFEDFLGCC YSSSPPTEPK VYCQSEPCEI NVNMPPNLDT 120 SDGGADRGET FTNPSSFFQP YHYSLVPAGG QLETCGANPS HAANDVCHVA FDSAETSVSG 180 FKSWMRQTQF LAEKPPAENS SNFQVLSLTM SPIAKSTAVG EPVPRKSIDT FGQRTSQYRG 240 VTRHRWTGRY EAHLWDNSCR KEGQTRKGRQ GGYDKEEKAA RAYDLAALKY WGPTTHINFP 300 LSAYEKELDE MKNMTRQEFV AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK 360 DLYLGTFSTQ EEAAEAYDIA AIKFRGTSAV TNFEISRYDV KRICSSSTLV AGDLIKRSPK 420 DSGPSSLVEY NSCASMASSP ALLPITNGEP SNELTEMMWN AGTDEPLQNQ VAVNTNEQLA 480 GSTSRNSSSL QGLNGPVSDS ARMDVEFGGG ANYPQAYFRL QGEKYDDEGT SASDPNSEWV 540 NQVPLFALWN N*

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MSNWLGFSLT PHLRVDDEEE AFGRDENPSQ DENAQEGCFQ TPISIMPLRS DGSLCALEPY  60
RRSNGTDEWS METANPTGEG PKFEDFLGCC YSSSPPTEPK VYCQSEPCEI NVNMPPNLDT  120
SDGGADRGET FTNPSSFFQP YHYSLVPAGG QLETCGANPS HAANDVCHVA FDSAETSVSG  180
FKSWMRQTQF LAEKPPAENS SNFQVLSLTM SPIAKSTAVG EPVPRKSIDT FGQRTSQYRG  240
VTRHRWTGRY EAHLWDNSCR KEGQTRKGRQ GGYDKEEKAA RAYDLAALKY WGPTTHINFP  300
LSAYEKELDE MKNMTRQEFV AHLRRKSSGF SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK  360
DLYLGTFSTQ EEAAEAYDIA AIKFRGTSAV TNFEISRYDV KRICSSSTLV AGDLIKRSPK  420
DSGPSSLVEY NSCASMASSP ALLPITNGEP SNELTEMMWN AGTDEPLQNQ VAVNTNEQLA  480
GSTSRNSSSL QGLNGPVSDS ARMDVEFGGG ANYPQAYFRL QGEKYDDEGT SASDPNSEWV  540
NQVPLFALWN N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-124	AP2 family protein