PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000336.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 376aa    MW: 41965 Da    PI: 7.6706
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000336.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.86.6e-07132153426
                  ---SGGGGTS--TTTTT-SS-SS CS
      zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                  + C+ f++ G C+ Gd C +aHg
  Oeu000336.1 132 SACPEFRK-GNCRKGDACEYAHG 153
                  67******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MQPEPVRHHH QTMMIGERNQ DGLTVHVPPI PWSFTTDDPA SYNLSPNMNI NGGSATDDCS  60
IFTALQRYLP SNSIREGDLT VDAYTCDHFR MFEFKVRKCS LGKSHDWTEC PYAHPGEKAR  120
RRDPRKFHYS GSACPEFRKG NCRKGDACEY AHGVFECWLH PARYRTQPCK DGLNCKRRVC  180
FFAHSTDQLR VLSPRAESYD GSPHRLAFMS SSDSGSPPTE SPPMSPMTSA TATSISSLSR  240
SLGSNSINEM IASLRQLQLN KVKSIPPSRN LQVGCSSSGL GSPRFPITRP GCFSLPTTPT  300
KSLTRASLGY ADPWEKDVGY EEEPAMERIE SGRDLRDQMF EKLSKENPLG NWPSLNANQA  360
QVPNHDVDWV SDMLN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-112C3H family protein