PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT40725

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 394aa MW: 45415.4 Da PI: 7.7062

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT40725	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.8	4.6e-49	42	167	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ + +gl OIT40725 42 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRNESCRPIGL 141 79*************************.89***********888889************************************999* PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 kktLvfy+g+apkg +++W+m+eyrl OIT40725 142 KKTLVFYSGKAPKGIRSSWIMNEYRL 167 **********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MAIAPFTSMS QSQQQQDESS SNNRDHDHDH DADDEHEHDM VMPGFRFHPT EEELVEFYLR 60 RKVEGKRFNV ELITFLDLYR YDPWELPAMA AIGEKEWFFY VPRDRKYRNG DRPNRVTTSG 120 YWKATGADRM IRNESCRPIG LKKTLVFYSG KAPKGIRSSW IMNEYRLPHH ETERLQKAEI 180 SLCRVYKRPG VEDHPSLPRS LPTTRASSSS SRAHHSIIKK HHHPQVVQDY RLLSPNYVGQ 240 SNSQQIDEKL NENSTASSTS TDHHHHRHVG TSLRLSSHQI TALTTSTITP FSSLISPNNT 300 AVVDDLHRLV NFQNLHNHHQ HFQNLSNHNI PAASIATHQF STLLQPQLAP QQPQPNLLLQ 360 GSLQPSAFSE RLWDWNSVQT DASCKDYQPN NPFN

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MAIAPFTSMS QSQQQQDESS SNNRDHDHDH DADDEHEHDM VMPGFRFHPT EEELVEFYLR  60
RKVEGKRFNV ELITFLDLYR YDPWELPAMA AIGEKEWFFY VPRDRKYRNG DRPNRVTTSG  120
YWKATGADRM IRNESCRPIG LKKTLVFYSG KAPKGIRSSW IMNEYRLPHH ETERLQKAEI  180
SLCRVYKRPG VEDHPSLPRS LPTTRASSSS SRAHHSIIKK HHHPQVVQDY RLLSPNYVGQ  240
SNSQQIDEKL NENSTASSTS TDHHHHRHVG TSLRLSSHQI TALTTSTITP FSSLISPNNT  300
AVVDDLHRLV NFQNLHNHHQ HFQNLSNHNI PAASIATHQF STLLQPQLAP QQPQPNLLLQ  360
GSLQPSAFSE RLWDWNSVQT DASCKDYQPN NPFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-115	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT40725